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Michael Love
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DESeq2 time course with two genotypes
deseq2
timecourse
michael love
multiple time points
6.3 years ago
cp1015
• 0
0
votes
4
replies
1.1k
views
DESeq2 Design Formula
DESeq2
michael love
updated 7.1 years ago by
Michael Love
43k • written 7.1 years ago by
gkuffel
▴ 10
0
votes
1
reply
1.6k
views
DESeq2 PCA plotting
deseq2
michael love
updated 7.2 years ago by
Michael Love
43k • written 7.2 years ago by
sam.far.7
• 0
1
vote
11
replies
2.4k
views
Need help with DESeq2's contrast feature
deseq2
michael love
updated 7.4 years ago by
Michael Love
43k • written 7.4 years ago by
Ashu
▴ 10
2
votes
3
replies
2.2k
views
DESeq2 for time series using time as continuous and looking at effect of time on DE
deseq2
timecourse
multiple time points
mlr
michael love
updated 7.6 years ago by
Michael Love
43k • written 7.6 years ago by
ap874
• 0
5
votes
10
replies
14k
views
Constructing tx2gene for Salmon txImport Quantification using Gencode Mouse Transcript Annotation
Michael Love
Salmon
tximport
tx2gene
updated 7.9 years ago by
Michael Love
43k • written 7.9 years ago by
pvd2107
▴ 30
6 results • Page
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Comment: Confirm that OpenStats will not be archived (pryr dependency)
by
Marina
• 0
Thank you!
Comment: AnnotationForge makeOrgPackage rsqlite_send_query error
by
ansley.r.burtch
• 0
Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack
by
TikTs3a3ssalpc
• 0
In the Gviz package, individual exon styles like line width or font color are usually global, much like how the Massar Service centralizes …
Comment: limpa analysis advice
by
Gordon Smyth
53k
I prefer for limpa to work on precursor intensities, because my understanding is that precursors are the basic unit of identification and q…
Answer: Confirm that OpenStats will not be archived (pryr dependency)
by
shepherl
4.3k
As long as OpenStats is building cleanly and all needed stated dependencies are on CRAN or Bioconductor, OpenStats will not be archived. I…
Votes
C: AnnotationForge makeOrgPackage rsqlite_send_query error
Answer: Limpa Pipeline Order
Answer: Array weights in dpcDE
Answer: Array weights in dpcDE
A: DESeq2: Is it possible to convert read counts to expression values via TPM and r
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