Showing : Michael Love • reset
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DESeq2 time course with two genotypes
deseq2 timecourse michael love multiple time points
6.1 years ago cp1015 • 0
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4
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1.1k
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DESeq2 Design Formula
DESeq2 michael love
updated 6.9 years ago by 43k • written 6.9 years ago by ▴ 10
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1.6k
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DESeq2 PCA plotting
deseq2 michael love
updated 7.0 years ago by 43k • written 7.0 years ago by • 0
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11
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Need help with DESeq2's contrast feature
deseq2 michael love
updated 7.3 years ago by 43k • written 7.3 years ago by ▴ 10
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3
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DESeq2 for time series using time as continuous and looking at effect of time on DE
deseq2 timecourse multiple time points mlr michael love
updated 7.4 years ago by 43k • written 7.4 years ago by • 0
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Constructing tx2gene for Salmon txImport Quantification using Gencode Mouse Transcript Annotation
Michael Love Salmon tximport tx2gene
updated 7.7 years ago by 43k • written 7.8 years ago by ▴ 30
6 results • Page 1 of 1
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Comment: featureCounts -L: high unassigned:mapq fraction by insurancetaaddddaxrealty • 0
FeatureCounts can behave differently with ONT cDNA BAM files due to long read splice patterns, and many users compare settings or presets m…
Comment: A problem occurs when running the monocle2 by e.j.aaw.g.erm • 0
For gamers facing technical issues or errors in complex scripts, the Redz Hub script download provides a reliable tool to optimize performa…
Answer: How can I correctly use phyloseq with Docker? by Kevin Blighe ★ 4.0k
The Bioconductor version must be compatible with the R version. Bioconductor version 3.18 is compatible with R version 4.3. The Dockerfile …
Answer: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace by Kevin Blighe ★ 4.0k
Your proposed code is correct and will achieve the desired outcome. The boolean filter expression `IFNg & TNFa | IFNg & IL2 | TNFa & IL2` i…
Answer: Guidance Requested on GCN Network Analysis and Module Enrichment in R by Kevin Blighe ★ 4.0k
The discrepancy between `final_exp1` and `final_exp2` could arise from several factors, despite matching dimensions. The `identical()` func…
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Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
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